Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015914540.1_cds_XP_016464534.1_57567
CDS Infomation

[gene=LOC107787468] [db_xref=GeneID:107787468] [protein=probable cyclic nucleotide-gated ion channel 14] [protein_id=XP_016464534.1] [location=join(24649..24680,24759..25308,25925..26137,26276..26577,27291..27402,27734..27970,28166..28924)] [gbkey=CDS]
Sequence

ATGACGGAGTTCAAGAAAGAGAAGACGGTAAGGTTTTACAATGATGGGAAACAGAACTTT
GAAACATCATGGGAGAAGAATGAGAACCATAATCTTGAAAAGCAACTACCTTTGTATAAG
TCTTGTGAGGGTAGAAATGTTGTTGACAAAGTTGGAGCAAGCAAGGTTCCCAAATTTGGA
AATTTGAAGGTTTTCCCAGAAAATTATGTACAAGAGAAAAAGAAAATTCTTGATCCAGGG
AGTGAAATAGTGATACAATGGAATAGGGTATTCTTGTGTTCTTGCTTGCTGGCTTTATTC
ATGGATCCATTATTTTTTTACATGCCATCAGTGGTGAAAAGGGGCAAGTCCTCATGTATG
TCAATTGACTTGAATCTTGGCATTATTGTCACATGCTTTCGGACAGTCGCCGATATATTC
TATATGTTACATGTGGTTATTAAGTTTAGGACTGCCTATGTTTCGCGAAGCTCGAGGGTA
TTTGGTAGGGGTGAACTTGTTATGGATAAGAAAATGATTGCAAGGAGGTACTTGAAGTCT
GATTTCTTCATTGATGCTATTGCTGCTCTGCCTCTTCCTCAGATTGTAATATGGTTCATC
ATACCTTCAATTAGAAGCTCTCATTCCGATCATACCAACAATGCTCTCGTACTAATAGTC
CTTCTGCAGTACCTGCCAAGACTCTATCTGATTTTCCCGTTGAGTGCTCAAATTATCAAA
GCTGCCGGGGTTGTCACGAAAACAGCTTGGGCAGGTGCTGCTTACAATCTCCTACTCTAC
ATGTTGGCGAGCCACGTCCTAGGTGCTTCCTGGTATTTATTGTCAATTGAGAGATATGCT
ACATGCTGGAAGATAGCTTGCAGAGAGGAGCTCAGTCCTATTCAATGCTCCAGTCATTTT
CTCGACTGTGGTACTATAAATCATGCAGACAGGGTAACATGGGTAAACAGCACCCAAGTT
TTCGGAAACTGCAATCCTTCTAACTCGACCATTTTCGACTTTGGAATATTTGCAAATGCA
GTTACAAACAATGTTGTCTCCACCGACTTCCTTGAAAAGTACTTGTACTGCTTGTGGTGG
GGTTTACAAAATTTAAGTTCTTATGGCCAGAACTTGTCCACGAGCACATTTATATGGGAA
ACTTCATTTGCAATTCTTATTGCTATATTGGGGCTAGTTCTGTTTGCTCATTTGATTGGA
AACATGCAGACATACTTACAATCTATCACTATGAGGCTTGAGGAGTGGAGGCTCAAGCGA
CGAGACACTGAAGAATGGATGAGGCACCGACAACTCCCTCAGGATCTTCAAGAACGTGTC
CGGCGTTTTGTACAGTACAAGTGGCTTGCCACTCGTGGAGTTGATGAAGAATCTATCCTG
CATGCTTTACCTTCAGATCTTCGTCGTGACATCCAACGCCACCTATGTTTAGACCTTGTT
CGGCGTGTTCCCTTCTTCTCACAAATGGATGATCAGCTGCTTGATGCCATATGTGAACGT
CTGGTTTCATCGTTATGTACTCAAGGAACATACATAGTACGTGAGGGTGATCCAGTAACT
GAAATGTTGTTTGTTATCAGAGGAACATTAGAGAGCTCGACCACGAACGGGGGTCGGACG
GGCTTCTTCAACTCAATTACTTTGAGGGCAGGTGACTTTTGCGGTGAGGAACTTCTTGCC
TGGGCATTGTTGCCAAGATCCACTCTTAACTTGCCTTCGTCGACGAGAACAGTGAGAGCC
CTATCGGAAGTAGAAGCCTTTGCTTTACGAGCAGAGGATCTCAAGTTCGTAGCCAATCAA
TTCAGACGTCTCCATAGTAAGAAGCTACAGCACACTTTCCGTTATTACTCTCACCACTGG
AGAACTTGGGCTGCCTGTTTTGTTCAAGCTGCTTGGCGTCGTTTCAAGAAGAGAAAGCTG
GCCAAAGATCTTAGTAGGAGTGAGTCCTTGTCTTATGCTACCGAGGATGAACAATCAGCA
AATGAAAGTGAATGTGAACATGAACATGAACATGAGGATGATCAACAAAAGAAAACTAAA
CCAGCTAACTCTTCCAATGTAAAGCAGAACCTTGGGGTAACAATATTGGCGTCAAGATTT
GCTGCAAACACAAGGAGAGGAGCTCAGAAGATGAAAGATATGGATTTGCCAAAGTTACAG
AAGCCCGAGGAGCCCGACTTTTCGGCTGAGCCAGATGATGACTAG

Peptide Sequence

PEP ID

XP_016464534.1
PEP Infomation

PREDICTED: probable cyclic nucleotide-gated ion channel 14 [Nicotiana tabacum]
Sequence

MTEFKKEKTVRFYNDGKQNFETSWEKNENHNLEKQLPLYKSCEGRNVVDKVGASKVPKFG
NLKVFPENYVQEKKKILDPGSEIVIQWNRVFLCSCLLALFMDPLFFYMPSVVKRGKSSCM
SIDLNLGIIVTCFRTVADIFYMLHVVIKFRTAYVSRSSRVFGRGELVMDKKMIARRYLKS
DFFIDAIAALPLPQIVIWFIIPSIRSSHSDHTNNALVLIVLLQYLPRLYLIFPLSAQIIK
AAGVVTKTAWAGAAYNLLLYMLASHVLGASWYLLSIERYATCWKIACREELSPIQCSSHF
LDCGTINHADRVTWVNSTQVFGNCNPSNSTIFDFGIFANAVTNNVVSTDFLEKYLYCLWW
GLQNLSSYGQNLSTSTFIWETSFAILIAILGLVLFAHLIGNMQTYLQSITMRLEEWRLKR
RDTEEWMRHRQLPQDLQERVRRFVQYKWLATRGVDEESILHALPSDLRRDIQRHLCLDLV
RRVPFFSQMDDQLLDAICERLVSSLCTQGTYIVREGDPVTEMLFVIRGTLESSTTNGGRT
GFFNSITLRAGDFCGEELLAWALLPRSTLNLPSSTRTVRALSEVEAFALRAEDLKFVANQ
FRRLHSKKLQHTFRYYSHHWRTWAACFVQAAWRRFKKRKLAKDLSRSESLSYATEDEQSA
NESECEHEHEHEDDQQKKTKPANSSNVKQNLGVTILASRFAANTRRGAQKMKDMDLPKLQ
KPEEPDFSAEPDDD

Transcript Sequence

Gene sequence data has not been registered.